ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9h19M1 - ECOD Domain | ECOD

ECOD/Domains/e9h19M1

e9h19M1

UID: 004896833

PDB

Range: M:1-302
PDB: 9H19 chain M(all domains)

Molecule: Reaction center protein M chain

3D Structure

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Related Domains

Browse other domains in Photo_RC →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPhoto_RC(5037.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll aBCL
Bacteriopheophytin aBPH
(2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoateCD4
SpirilloxanthinCRT
FE (III) IONFE
metal

Pfam Families

PF00124Photo_RC

Photosynthetic reaction centre protein

External Links

ECOD PDB View: 9H19 RCSB PDB: 9H19 PDBe: 9H19

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Heme cHEC

MENAQUINONE 8MQ8

1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINEPEX

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer.