ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9hd4B1 - ECOD Domain | ECOD

ECOD/Domains/e9hd4B1

e9hd4B1

UID: 004899334

PDB

Range: B:1-114
PDB: 9HD4 chain B(all domains)

Molecule: Fucose-binding lectin PA-IIL

3D Structure

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Related Domains

Browse other domains in PA-IIL →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupCalcium-mediated lectin(10.6)

TT-groupCalcium-mediated lectin(10.6.1)

FFamilyPA-IIL(10.6.1.1)

Ligands

in contact, ≤ 4 Å

~{N}-[[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]methyl]-4-[(~{Z})-phenyldiazenyl]benzenesulfonamideA1IT5
Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

Fucose-binding lectin II (PA-IIL)

External Links

ECOD PDB View: 9HD4 RCSB PDB: 9HD4 PDBe: 9HD4

Downloads

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