ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9hd4D1 - ECOD Domain | ECOD

ECOD/Domains/e9hd4D1

e9hd4D1

UID: 004899336

PDB

Range: D:1-114
PDB: 9HD4 chain D(all domains)

Molecule: Fucose-binding lectin PA-IIL

3D Structure

Loading viewer...

Related Domains

Browse other domains in PA-IIL →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupCalcium-mediated lectin(10.6)

TT-groupCalcium-mediated lectin(10.6.1)

FFamilyPA-IIL(10.6.1.1)

Ligands

in contact, ≤ 4 Å

~{N}-[[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]methyl]-4-[(~{Z})-phenyldiazenyl]benzenesulfonamideA1IT5
Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

Fucose-binding lectin II (PA-IIL)

External Links

ECOD PDB View: 9HD4 RCSB PDB: 9HD4 PDBe: 9HD4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure