ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9hemB2 - ECOD Domain | ECOD

ECOD/Domains/e9hemB2

e9hemB2

UID: 004899460

PDB

Range: B:33-252
PDB: 9HEM chain B(all domains)

Molecule: NADH-quinone oxidoreductase subunit F

3D Structure

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Related Domains

Browse other domains in Complex1_51K →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNqo1 FMN-binding domain-like(4335)

HH-groupNqo1 FMN-binding domain-like(4335.1)

TT-groupNqo1 FMN-binding domain-like(4335.1.1)

FFamilyComplex1_51K(4335.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
Sodium ionNA
metal
Nicotinamide-adenine-dinucleotideNAD
Iron/sulfur clusterSF4

+ 2 additives (Glycerol, Sulfate ion)

GlycerolGOL

Pfam Families

PF01512Complex1_51K

Nuo51 FMN-binding domain

ClanCL0867NqrA_FMN-like

External Links

ECOD PDB View: 9HEM RCSB PDB: 9HEM PDBe: 9HEM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer.