ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ibpB1 - ECOD Domain | ECOD

ECOD/Domains/e9ibpB1

e9ibpB1

UID: 004901071

PDB

Range: B:67-166,B:231-232,B:304-350
PDB: 9IBP chain B(all domains)

Molecule: Immunogenic protein

3D Structure

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Related Domains

Browse other domains in NMT1_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyNMT1_3(7523.1.1.32)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerol, Sulfate ion)

GlycerolGOL
Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

NMT1-like family

ClanCL0177PBP

External Links

ECOD PDB View: 9IBP RCSB PDB: 9IBP PDBe: 9IBP

Downloads

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