ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9khjB2 - ECOD Domain | ECOD

ECOD/Domains/e9khjB2

e9khjB2

UID: 004904989

PDB

Range: B:213-741
PDB: 9KHJ chain B(all domains)

Molecule: Short transient receptor potential channel 5

3D Structure

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Related Domains

Browse other domains in Ion_trans, TRP_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans, TRP_2(5054.1.1.65)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatePOV
PhosphatidylethanolaminePTY
Cholesterol hemisuccinateY01
(2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoateYZY

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

Transient receptor ion channel II

External Links

ECOD PDB View: 9KHJ RCSB PDB: 9KHJ PDBe: 9KHJ

Downloads

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