ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9khkA2 - ECOD Domain | ECOD

ECOD/Domains/e9khkA2

e9khkA2

UID: 004904998

RepresentativePDB

Range: A:213-748
PDB: 9KHK chain A(all domains)

Molecule: Short transient receptor potential channel 5

3D Structure

Loading viewer...

Related Domains

Browse other domains in TRP_2, YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyTRP_2, YVC1_C(5054.1.1.72)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatePOV
PhosphatidylethanolaminePTY
Cholesterol hemisuccinateY01
(2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoateYZY

Pfam Families

Transient receptor ion channel II

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 9KHK RCSB PDB: 9KHK PDBe: 9KHK

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer.