ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9layH2 - ECOD Domain | ECOD

ECOD/Domains/e9layH2

e9layH2

UID: 004905490

PDB

Range: H:117-231
PDB: 9LAY chain H(all domains)

Molecule: 4Fe-4S ferredoxin iron-sulfur binding domain protein

3D Structure

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Related Domains

Browse other domains in Fer4, Fer4_7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupalpha-helical ferredoxin-like(187)

HH-groupalpha-helical ferredoxin(187.1)

TT-groupalpha-helical ferredoxin(187.1.1)

FFamilyFer4, Fer4_7(187.1.1.10)

Ligands

in contact, ≤ 4 Å

FE3-S4 CLUSTERF3S
Protoporphyrin ix containing feHEM
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV
Iron/sulfur clusterSF4

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Pfam Families

4Fe-4S binding domain

ClanCL03444Fe-4S

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 9LAY RCSB PDB: 9LAY PDBe: 9LAY

Downloads

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