ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9md8A1 - ECOD Domain | ECOD

ECOD/Domains/e9md8A1

e9md8A1

UID: 004909186

PDB

Range: A:43-511
PDB: 9MD8 chain A(all domains)

Molecule: Protease

3D Structure

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Related Domains

Browse other domains in alpha/beta hydrolase fold / TAP-like protein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyalpha/beta hydrolase fold / TAP-like protein(7579.1.1.8)

Ligands

in contact, ≤ 4 Å

N-carboxy-L-phenylalanyl-N-{(2S,3R)-3-hydroxy-4-methoxy-4-oxo-1-[(3R)-2-oxo-3,4-dihydro-2H-pyrrol-3-yl]butan-2-yl}-L-lysinamideA1BK3

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF00561Abhydrolase_1

alpha/beta hydrolase fold

ClanCL0028AB_hydrolase

PF08386Abhydrolase_4

TAP-like protein

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 9MD8 RCSB PDB: 9MD8 PDBe: 9MD8

Downloads

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