ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9p3nD2 - ECOD Domain | ECOD

ECOD/Domains/e9p3nD2

e9p3nD2

UID: 004915894

PDB

Range: D:336-997
PDB: 9P3N chain D(all domains)

Molecule: Green fluorescent protein,Transient receptor potential cation channel subfamily M member 5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ion_trans, TRPM2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupAnkyrin repeat(109.3)

TT-groupAnkyrin repeat(109.3.1)

FFamilyIon_trans, TRPM2(109.3.1.167)

Ligands

in contact, ≤ 4 Å

5-chloro-N-[(5-chloro-1,3-thiazol-2-yl)methyl]-1,2-benzothiazol-6-amineA1CGW
Calcium ionCA
metal
(25R)-14beta,17beta-spirost-5-en-3beta-olYUV
(2R)-2-(hydroxymethyl)-4-{[(25R)-10alpha,14beta,17beta-spirost-5-en-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosideYUY

Shown in the structure viewer.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

TRPM2-like domain

External Links

ECOD PDB View: 9P3N RCSB PDB: 9P3N PDBe: 9P3N

Downloads

Download Domain FASTA Full PDB Structure