ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9r8bB1 - ECOD Domain | ECOD

ECOD/Domains/e9r8bB1

e9r8bB1

UID: 004918217

PDB

Range: B:62-323
PDB: 9R8B chain B(all domains)

Molecule: Serine/threonine-protein kinase PLK1

3D Structure

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Related Domains

Browse other domains in Pkinase, Pkinase_fungal →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Pkinase_fungal(206.1.1.72)

Ligands

in contact, ≤ 4 Å

(2~{Z})-2-cyano-2-[3-ethyl-5-[(~{E})-[2-[methyl-(1-methylpiperidin-4-yl)amino]pyridin-4-yl]iminomethyl]-4-oxidanylidene-1,3-thiazol-2-ylidene]-~{N}-[2,2,2-tris(fluoranyl)ethyl]ethanamideA1JCP
Chloride ionCL

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

PF17667Pkinase_fungal

Fungal protein kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 9R8B RCSB PDB: 9R8B PDBe: 9R8B

Downloads

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