ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ia6C1 - ECOD Domain | ECOD

ECOD/Domains/e9ia6C1

e9ia6C1

UID: 004919093

PDB

Range: C:20-147
PDB: 9IA6 chain C(all domains)

Molecule: 5-hydroxymethyl-dUMP N-hydrolase

3D Structure

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Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

8-[3-(6-cyano-1~{H}-indol-2-yl)-5-[[1-[2-(methylamino)phenyl]carbonylpiperidin-4-yl]amino]-1,2,4-triazol-1-yl]octanoic acidA1I1U

Shown in the structure viewer.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 9IA6 RCSB PDB: 9IA6 PDBe: 9IA6

Downloads

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