ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9w4mC2 - ECOD Domain | ECOD

ECOD/Domains/e9w4mC2

e9w4mC2

UID: 004922555

PDB

Range: C:470-470,C:550-711
PDB: 9W4M chain C(all domains)

Molecule: Maltose/maltodextrin-binding periplasmic protein,Transient receptor potential cation channel subfamily V member 1

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

~{N}-[4-[6-[4-(trifluoromethyl)phenyl]pyrimidin-4-yl]oxy-1,3-benzothiazol-2-yl]ethanamideA1D6R
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 9W4M RCSB PDB: 9W4M PDBe: 9W4M

Downloads

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