ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9w4tB2 - ECOD Domain | ECOD

ECOD/Domains/e9w4tB2

e9w4tB2

UID: 004922569

PDB

Range: B:470-470,B:550-711
PDB: 9W4T chain B(all domains)

Molecule: Maltose/maltodextrin-binding periplasmic protein,Transient receptor potential cation channel subfamily V member 1

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

(~{Z})-3-(4-~{tert}-butylphenyl)-~{N}-(2,3-dihydro-1,4-benzodioxin-6-yl)prop-2-enamideA1D6W
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 9W4T RCSB PDB: 9W4T PDBe: 9W4T

Downloads

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