ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9x54A1 - ECOD Domain | ECOD

ECOD/Domains/e9x54A1

e9x54A1

UID: 004923400

PDB

Range: A:64-200
PDB: 9X54 chain A(all domains)

Molecule: Rho GDP-dissociation inhibitor 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rho_GDI →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyRho_GDI(11.1.1.36)

Ligands

in contact, ≤ 4 Å

(3~{R})-~{N}-[2-oxidanylidene-2-[[(~{R})-(4-phenylphenyl)-thiophen-2-yl-methyl]amino]ethyl]pyrrolidine-3-carboxamideA1EY5

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF02115Rho_GDI

RHO protein GDP dissociation inhibitor

ClanCL0159E-set

External Links

ECOD PDB View: 9X54 RCSB PDB: 9X54 PDBe: 9X54

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure