ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A060HNA0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A060HNA0_F1_nD1

A0A060HNA0_F1_nD1

UID: 004928594

AlphaFold

Range: 41-195,221-230
AlphaFold: AF-A0A060HNA0
UniProt: A0A060HNA0 (all domains)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4e(221.1.2.20)

Pfam Families

PF00900Ribosomal_S4e

Ribosomal family S4e

ClanCL0021OB

External Links

AlphaFold DB: A0A060HNA0 UniProt: A0A060HNA0

Representative

This domain is classified based on similarity to:

A0A9Y1BIU6_F1_nD1

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-195,221-230