ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A520KSC5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A520KSC5_F1_nD1

A0A520KSC5_F1_nD1

UID: 004935852

AlphaFold

Range: 1-75
AlphaFold: AF-A0A520KSC5
UniProt: A0A520KSC5 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SHS2_Rpb7-N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupFlavin-binding protein dodecin-like(872.1)

TT-groupFlavin-binding protein dodecin-like(872.1.1)

FFamilySHS2_Rpb7-N(872.1.1.1)

Pfam Families

PF03876SHS2_Rpb7-N

SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397

ClanCL0319SHS2

External Links

AlphaFold DB: A0A520KSC5 UniProt: A0A520KSC5

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-75