ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ne8A1 - ECOD Domain | ECOD

ECOD/Domains/e1ne8A1

e1ne8A1

UID: 000000494

RepresentativePDB

Range: A:1-116
PDB: 1NE8 chain A(all domains)
UniProt: P96622 (all domains)
Gene: ndoA

Molecule: conserved hypothetical protein YDCE

3D Structure

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Related Domains

Browse other domains in PemK_toxin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyPemK_toxin(4.1.1.30)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol1PG
drugDrugBank DB02042

+ 1 additive (Acetic acid)

Acetic acidACY
DrugBank DB03166

Pfam Families

PF02452PemK_toxin

PemK-like, MazF-like toxin of type II toxin-antitoxin system

ClanCL0010SH3

External Links

ECOD PDB View: 1NE8 RCSB PDB: 1NE8 PDBe: 1NE8 UniProt: P96622

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.