ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A9Y1BIK8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A9Y1BIK8_F1_nD1

A0A9Y1BIK8_F1_nD1

UID: 004943159

AlphaFold

Range: 11-115
AlphaFold: AF-A0A9Y1BIK8
UniProt: A0A9Y1BIK8 (all domains)
Gene: rpsE

Protein: Small ribosomal subunit protein uS5

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5_C(330.1.1.21)

Pfam Families

PF03719Ribosomal_S5_C

Ribosomal protein S5, C-terminal domain

ClanCL0329S5

External Links

AlphaFold DB: A0A9Y1BIK8 UniProt: A0A9Y1BIK8

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 11-115