ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A9Y1BM59_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A9Y1BM59_F1_nD2

A0A9Y1BM59_F1_nD2

UID: 004944896

AlphaFold

Range: 111-238
AlphaFold: AF-A0A9Y1BM59
UniProt: A0A9Y1BM59 (all domains)
Gene: cas6

Protein: CRISPR-associated endoribonuclease Cas6

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas_Cas6_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas_Cas6_C(304.51.1.1)

Pfam Families

PF01881Cas_Cas6_C

CRISPR associated protein Cas6, C-terminal

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: A0A9Y1BM59 UniProt: A0A9Y1BM59

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-238