ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5UJX7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A5UJX7_F1_nD2

A5UJX7_F1_nD2

UID: 004952595

AlphaFold

Range: 31-65,166-255,501-535
AlphaFold: AF-A5UJX7
UniProt: A5UJX7 (all domains)
Gene: Msm_0300

Protein: Peptide/nickel ABC transporter, solute-binding component

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

AlphaFold DB: A5UJX7 UniProt: A5UJX7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-65,166-255,501-535