ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1hiwR1 - ECOD Domain | ECOD

ECOD/Domains/e1hiwR1

e1hiwR1

UID: 000049774

PDB

Range: R:7-118
PDB: 1HIW chain R(all domains)
UniProt: P12497 (all domains)
Gene: gag-pol

Molecule: HIV-1 MATRIX PROTEIN

3D Structure

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Related Domains

Browse other domains in Gag_p17 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRetroviral matrix proteins(612)

HH-groupRetroviral matrix proteins(612.1)

TT-groupRetroviral matrix proteins(612.1.1)

FFamilyGag_p17(612.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00540Gag_p17

gag gene protein p17 (matrix protein)

ClanCL0074Matrix

External Links

ECOD PDB View: 1HIW RCSB PDB: 1HIW PDBe: 1HIW UniProt: P12497

Downloads

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