ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1o84A1 - ECOD Domain | ECOD

ECOD/Domains/e1o84A1

e1o84A1

UID: 000049817

PDB

Range: A:1-70
PDB: 1O84 chain A(all domains)
UniProt: Q47765 (all domains)
Gene: as-48

Molecule: PEPTIDE ANTIBIOTIC AS-48

3D Structure

Loading viewer...

Related Domains

Browse other domains in Bacteriocin_IId →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSaposin-like(198)

HH-groupBacteriocin AS-48-related(198.2)

TT-groupBacteriocin AS-48-related(198.2.1)

FFamilyBacteriocin_IId(198.2.1.1)

Ligands

in contact, ≤ 4 Å

DecaneD10

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF09221Bacteriocin_IId

Bacteriocin class IId cyclical uberolysin-like

External Links

ECOD PDB View: 1O84 RCSB PDB: 1O84 PDBe: 1O84 UniProt: Q47765

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.