ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4J9Y4_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q4J9Y4_F1_nD4

Q4J9Y4_F1_nD4

UID: 005011004

AlphaFold

Range: 266-300,441-455,476-570,831-865
AlphaFold: AF-Q4J9Y4
UniProt: Q4J9Y4 (all domains)
Gene: Saci_1038

Protein: Universally conserved protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

AlphaFold DB: Q4J9Y4 UniProt: Q4J9Y4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-300,441-455,476-570,831-865