ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q4JB28_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4JB28_F1_nD1

Q4JB28_F1_nD1

UID: 005011527

AlphaFold

Range: 1-190
AlphaFold: AF-Q4JB28
UniProt: Q4JB28 (all domains)
Gene: rrp42

Protein: Exosome complex component Rrp42

3D Structure

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Related Domains

Browse other domains in RNase_PH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRNase_PH(212.1.1.10)

Pfam Families

PF01138RNase_PH

3' exoribonuclease family, domain 1

ClanCL0329S5

External Links

AlphaFold DB: Q4JB28 UniProt: Q4JB28

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 1-190