ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JFN0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JFN0_F1_nD1

Q5JFN0_F1_nD1

UID: 005013411

AlphaFold

Range: 1-120
AlphaFold: AF-Q5JFN0
UniProt: Q5JFN0 (all domains)
Gene: TK0184

Protein: snoRNP component, Nop56p/58p homolog

3D Structure

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Related Domains

Browse other domains in Nop5_56-rel_N_Arc →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupNop N-terminal domain(3407)

HH-groupNop N-terminal domain(3407.1)

TT-groupNop N-terminal domain(3407.1.1)

FFamilyNop5_56-rel_N_Arc(3407.1.1.2)

Pfam Families

PF21572Nop5_56-rel_N_Arc

Archaeal Nop5/56-rel, N-terminal domain

ClanCL0759Nop_N_sf

External Links

AlphaFold DB: Q5JFN0 UniProt: Q5JFN0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-120