ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JI84_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JI84_F1_nD1

Q5JI84_F1_nD1

UID: 005014567

AlphaFold

Range: 41-130,261-330
AlphaFold: AF-Q5JI84
UniProt: Q5JI84 (all domains)
Gene: TK0935

Protein: TRAP-type transporter, periplasmic component

3D Structure

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Related Domains

Browse other domains in NMT1_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyNMT1_3(7523.1.1.32)

Pfam Families

NMT1-like family

ClanCL0177PBP

External Links

AlphaFold DB: Q5JI84 UniProt: Q5JI84

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 41-130,261-330