ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5JI88_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JI88_F1_nD1

Q5JI88_F1_nD1

UID: 005014572

AlphaFold

Range: 1-165
AlphaFold: AF-Q5JI88
UniProt: Q5JI88 (all domains)
Gene: TK0931

Protein: Probable transposase

3D Structure

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Related Domains

Browse other domains in HTH_OrfB_IS605 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupSmall protein B (SmpB)(2.21)

TT-groupSmall protein B (SmpB)(2.21.1)

FFamilyHTH_OrfB_IS605(2.21.1.3)

Pfam Families

PF12323HTH_OrfB_IS605

Helix-turn-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: Q5JI88 UniProt: Q5JI88

Representative

This domain is classified based on similarity to:

A0A133CL90_F1_nD2

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-165