ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JI88_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5JI88_F1_nD2

Q5JI88_F1_nD2

UID: 005014573

AlphaFold

Range: 171-360
AlphaFold: AF-Q5JI88
UniProt: Q5JI88 (all domains)
Gene: TK0931

Protein: Probable transposase

3D Structure

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Related Domains

Browse other domains in OrfB_IS605 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyOrfB_IS605(2484.1.1.124)

Pfam Families

PF01385OrfB_IS605

Probable transposase

ClanCL0219RNase_H

External Links

AlphaFold DB: Q5JI88 UniProt: Q5JI88

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-360