ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5JIY5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JIY5_F1_nD1

Q5JIY5_F1_nD1

UID: 005014911

AlphaFold

Range: 6-65
AlphaFold: AF-Q5JIY5
UniProt: Q5JIY5 (all domains)
Gene: spt4

Protein: Transcription elongation factor Spt4

3D Structure

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Related Domains

Browse other domains in Spt4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilySpt4(375.1.1.33)

Pfam Families

Spt4/RpoE2 zinc finger

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q5JIY5 UniProt: Q5JIY5

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-65