ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q6LZL0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6LZL0_F1_nD1

Q6LZL0_F1_nD1

UID: 005016763

AlphaFold

Range: 1-170,351-390
AlphaFold: AF-Q6LZL0
UniProt: Q6LZL0 (all domains)
Gene: truD2

Protein: Probable tRNA pseudouridine synthase D 2 (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D 2) (tRNA-uridine isomerase D 2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruD(304.102.1.2)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q6LZL0 UniProt: Q6LZL0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-170,351-390