ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q6M001_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6M001_F1_nD2

Q6M001_F1_nD2

UID: 005016957

AlphaFold

Range: 136-310
AlphaFold: AF-Q6M001
UniProt: Q6M001 (all domains)
Gene: MMP0472

Protein: Probable integrase/recombinase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Phage_integrase →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyPhage_integrase(101.1.8.1)

Pfam Families

PF00589Phage_integrase

Phage integrase family

ClanCL0382DNA-mend

External Links

AlphaFold DB: Q6M001 UniProt: Q6M001

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-310