ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8PSS8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8PSS8_F1_nD1

Q8PSS8_F1_nD1

UID: 005018169

AlphaFold

Range: 6-45,66-215
AlphaFold: AF-Q8PSS8
UniProt: Q8PSS8 (all domains)
Gene: MM_2998

Protein: Transposase

3D Structure

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Related Domains

Browse other domains in DDE_3 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_3(2484.1.1.66)

Pfam Families

DDE superfamily endonuclease

ClanCL0219RNase_H

External Links

AlphaFold DB: Q8PSS8 UniProt: Q8PSS8

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-45,66-215