ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8PVI9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8PVI9_F1_nD1

Q8PVI9_F1_nD1

UID: 005019519

AlphaFold

Range: 11-400
AlphaFold: AF-Q8PVI9
UniProt: Q8PVI9 (all domains)
Gene: MM_1974

Protein: tRNA carboxymethyluridine synthase (EC 2.3.1.311)

3D Structure

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Related Domains

Browse other domains in Radical_SAM_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM_C(2002.1.1.452)

Pfam Families

PF16199Radical_SAM_C

Radical_SAM C-terminal domain

External Links

AlphaFold DB: Q8PVI9 UniProt: Q8PVI9

Representative

This domain is classified based on similarity to:

EPP00019845_nD2

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-400