ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8PVV1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8PVV1_F1_nD3

Q8PVV1_F1_nD3

UID: 005019670

AlphaFold

Range: 331-560
AlphaFold: AF-Q8PVV1
UniProt: Q8PVV1 (all domains)
Gene: MM_1859

Protein: Dipeptide/oligopeptide binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

AlphaFold DB: Q8PVV1 UniProt: Q8PVV1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 331-560