ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8TXJ7_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8TXJ7_F1_nD3

Q8TXJ7_F1_nD3

UID: 005023553

AlphaFold

Range: 166-355
AlphaFold: AF-Q8TXJ7
UniProt: Q8TXJ7 (all domains)
Gene: truD

Protein: Probable tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)

3D Structure

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Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-grouptRNA pseudouridine synthase TruD insertion domain(1056)

HH-grouptRNA pseudouridine synthase TruD insertion domain(1056.1)

TT-grouptRNA pseudouridine synthase TruD insertion domain(1056.1.1)

FFamilyTruD(1056.1.1.1)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q8TXJ7 UniProt: Q8TXJ7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-355