ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A2P6VT98_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A2P6VT98_F1_nD1

A0A2P6VT98_F1_nD1

UID: 005039118

AlphaFold

Range: 6-484
AlphaFold: AF-A0A2P6VT98
UniProt: A0A2P6VT98 (all domains)

3D Structure

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Related Domains

Browse other domains in RtcB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupHypothetical protein PH1602(304.106)

TT-groupHypothetical protein PH1602(304.106.1)

FFamilyRtcB(304.106.1.1)

Pfam Families

tRNA-splicing ligase RtcB

External Links

AlphaFold DB: A0A2P6VT98 UniProt: A0A2P6VT98

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-484