ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A662PGG4_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A662PGG4_F1_nD4

A0A662PGG4_F1_nD4

UID: 005042842

AlphaFold

Range: 541-680
AlphaFold: AF-A0A662PGG4
UniProt: A0A662PGG4 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042)

HH-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042.1)

TT-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042.1.1)

FFamilyRNA_pol_Rpb2_6(4042.1.1.1)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

External Links

AlphaFold DB: A0A662PGG4 UniProt: A0A662PGG4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-680