ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

UPI00121B23D2_nD1 - ECOD Domain | ECOD

ECOD/Domains/UPI00121B23D2_nD1

UPI00121B23D2_nD1

UID: 005052212

AlphaFold

Range: 1-240
AlphaFold: AF-UPI00121B23D2
UniProt: UPI00121B23D2 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruB_C_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruB_C_2(304.102.1.13)

Pfam Families

PF16198TruB_C_2

tRNA pseudouridylate synthase B C-terminal domain

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: UPI00121B23D2 UniProt: UPI00121B23D2

Representative

This domain is classified based on similarity to:

EPP00014052_nD1

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-240