ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A842WYM4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A842WYM4_F1_nD1

A0A842WYM4_F1_nD1

UID: 005055832

AlphaFold

Range: 6-468
AlphaFold: AF-A0A842WYM4
UniProt: A0A842WYM4 (all domains)

Protein: deleted

3D Structure

Loading viewer...

Related Domains

Browse other domains in RtcB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupHypothetical protein PH1602(304.106)

TT-groupHypothetical protein PH1602(304.106.1)

FFamilyRtcB(304.106.1.1)

Pfam Families

tRNA-splicing ligase RtcB

External Links

AlphaFold DB: A0A842WYM4 UniProt: A0A842WYM4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-468