ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UPI002A99611F_nD4 - ECOD Domain | ECOD

ECOD/Domains/UPI002A99611F_nD4

UPI002A99611F_nD4

UID: 005063872

AlphaFold

Range: 576-715
AlphaFold: AF-UPI002A99611F
UniProt: UPI002A99611F (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042)

HH-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042.1)

TT-groupbarrel domain in beta subunit of DNA dependent RNA-polymerase(4042.1.1)

FFamilyRNA_pol_Rpb2_6(4042.1.1.1)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

External Links

AlphaFold DB: UPI002A99611F UniProt: UPI002A99611F

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 576-715