ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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UPI0030E04B42_nD3 - ECOD Domain | ECOD

ECOD/Domains/UPI0030E04B42_nD3

UPI0030E04B42_nD3

UID: 005065107

AlphaFold

Range: 181-320
AlphaFold: AF-UPI0030E04B42
UniProt: UPI0030E04B42 (all domains)

3D Structure

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Related Domains

Browse other domains in OrfB_IS605 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyOrfB_IS605(2484.1.1.124)

Pfam Families

PF01385OrfB_IS605

Probable transposase

ClanCL0219RNase_H

External Links

AlphaFold DB: UPI0030E04B42 UniProt: UPI0030E04B42

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-320