ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

UPI003166BC42_nD3 - ECOD Domain | ECOD

ECOD/Domains/UPI003166BC42_nD3

UPI003166BC42_nD3

UID: 005066894

AlphaFold

Range: 471-555
AlphaFold: AF-UPI003166BC42
UniProt: UPI003166BC42 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb2_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961)

HH-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1)

TT-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1.1)

FFamilyRNA_pol_Rpb2_4(4961.1.1.1)

Pfam Families

PF04566RNA_pol_Rpb2_4

RNA polymerase Rpb2, domain 4

External Links

AlphaFold DB: UPI003166BC42 UniProt: UPI003166BC42

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 471-555