ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

UPI003173913F_nD1 - ECOD Domain | ECOD

ECOD/Domains/UPI003173913F_nD1

UPI003173913F_nD1

UID: 005068716

AlphaFold

Range: 6-325
AlphaFold: AF-UPI003173913F
UniProt: UPI003173913F (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_B_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_B_exo1(2484.1.1.34)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

External Links

AlphaFold DB: UPI003173913F UniProt: UPI003173913F

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-325