ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

UPI003173C535_nD5 - ECOD Domain | ECOD

ECOD/Domains/UPI003173C535_nD5

UPI003173C535_nD5

UID: 005068754

AlphaFold

Range: 781-905
AlphaFold: AF-UPI003173C535
UniProt: UPI003173C535 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb2_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupSingle hybrid motif(325.1.7)

FFamilyRNA_pol_Rpb2_6(325.1.7.2)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

External Links

AlphaFold DB: UPI003173C535 UniProt: UPI003173C535

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 781-905