ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UPI003249A588_nD3 - ECOD Domain | ECOD

ECOD/Domains/UPI003249A588_nD3

UPI003249A588_nD3

UID: 005073048

AlphaFold

Range: 476-565
AlphaFold: AF-UPI003249A588
UniProt: UPI003249A588 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961)

HH-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1)

TT-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1.1)

FFamilyRNA_pol_Rpb2_4(4961.1.1.1)

Pfam Families

PF04566RNA_pol_Rpb2_4

RNA polymerase Rpb2, domain 4

External Links

AlphaFold DB: UPI003249A588 UniProt: UPI003249A588

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 476-565