ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UPI003254EDE3_nD2 - ECOD Domain | ECOD

ECOD/Domains/UPI003254EDE3_nD2

UPI003254EDE3_nD2

UID: 005076410

AlphaFold

Range: 6-135,171-410
AlphaFold: AF-UPI003254EDE3
UniProt: UPI003254EDE3 (all domains)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_B_exo1(2484.1.1.34)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

External Links

AlphaFold DB: UPI003254EDE3 UniProt: UPI003254EDE3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-135,171-410