ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9i5fA1 - ECOD Domain | ECOD

ECOD/Domains/e9i5fA1

e9i5fA1

UID: 005084731

PDB

Range: A:1-210
PDB: 9I5F chain A(all domains)

Molecule: Glyceraldehyde-3-phosphate dehydrogenase (Gap)

3D Structure

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Related Domains

Browse other domains in Gp_dh_N, Gp_dh_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGp_dh_N, Gp_dh_C(2003.1.1.185)

Ligands

in contact, ≤ 4 Å

ArsenateART
Sodium ionNA
metal
Nicotinamide-adenine-dinucleotideNAD

+ 2 additives (Ethanol, Sulfate ion)

EthanolEOH
Sulfate ionSO4

Pfam Families

PF00044Gp_dh_N

Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

PF02800Gp_dh_C

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 9I5F RCSB PDB: 9I5F PDBe: 9I5F

Downloads

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