ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9rj9A3 - ECOD Domain | ECOD

ECOD/Domains/e9rj9A3

e9rj9A3

UID: 005086085

PDB

Range: A:207-544
PDB: 9RJ9 chain A(all domains)

Molecule: Iron hydrogenase 1

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+)402
Chloride ionCL
Magnesium ionMG
metal
Iron/sulfur clusterSF4

+ 1 additive (Glycerol)

Glycerol

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 9RJ9 RCSB PDB: 9RJ9 PDBe: 9RJ9

Downloads

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