ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1d7wD1 - ECOD Domain | ECOD

ECOD/Domains/e1d7wD1

e1d7wD1

UID: 005087611

PDB

Range: D:2-465
PDB: 1D7W chain D(all domains)
UniProt: P05164 (all domains)
Gene: MPO

Molecule: MYELOPEROXIDASE

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

Bromide ionBR
Calcium ionCA
metal
Protoporphyrin ix containing feHEM
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 2 additives (Acetate ion, Sulfate ion)

Acetate ionACT

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 1D7W RCSB PDB: 1D7W PDBe: 1D7W UniProt: P05164

Downloads

Download Domain PDB Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer.